Cn3D

Cn3D is a cool little application that helps you see 3D structures from NCBI's Entrez structure database. You can use it on Windows, Mac, and Unix systems, which is super convenient!

Features of Cn3D

This tool does a lot! It shows structure, sequence, and alignment. Plus, it lets you annotate and align data with different algorithms like block align single or BLAST single. It's like having a science lab right on your computer!

Importing and Exporting Data

Cn3D has an easy-to-use interface. You can import data from CN3 files or grab it directly from the network by entering the PDB or MMDB ID. Want to save what you see? You can export images to PNG format right from the main window.

Analyzing Data with Ease

The program includes handy view tools for analyzing data. You can zoom in or out, jump between frames, and even switch stereo mode on or off! You have control over animation speed too—play, spin, or stop frames as you like.

Showcase Your Findings

Cn3D lets you display aligned chains, domains, or residues easily. You can also highlight unaligned residues and show selected domains. Plus, there's a feature for annotating data and keeping track of your favorite items—super helpful!

Customization Options

You can set up the rendering mode in various ways like bond sides or atom slices. Choose between perspective or orthographic projection types. If you're in a rush, pick one of the preset rendering profiles without needing to tweak everything manually.

Final Thoughts on Cn3D

In summary, Cn3D combines powerful features with user-friendly design for viewing 3D structures from the National Center for Biotechnology Information's Entrez service.