Mascot Wizard

Mascot Wizard was developed to be a simple desktop tool that provides a drag and drop interface for submitting peptide mass fingerprint searches to a Mascot server. Internally, Mascot Wizard uses the Mascot Distiller libraries to process raw data files into high quality peak lists.

Although you can only process one file at a time, everything is fully automated. However, note that Mascot Wizard is only for peptide mass fingerprints. If your file contains MS/MS data, you have to use Mascot Distiller to process it.

Supported File Formats: - Agilent: DataAnalysis (yep) (LC/MS Trap) Analyst (wiff) (LC/MS TOF) MassHunter (Q-TOF) - AB SCIEX: Analyst (QStar, QTrap) Data Explorer (Voyager, 4700, 4800) - Bruker: Data/Flex Analysis (yep) format (Esquire) Data/Flex Analysis (baf) format (Apex, MicrOTOF) XMASS/XTOF (Reflex, Biflex, etc.) - Shimadzu: Kompact (Axima) LCMSSolution (LCMS-IT-TOF) - Thermo: Xcalibur (LCQ, LTQ, Orbitrap) - Waters: MassLynx (QTof, M@ldi, TofSpec) mzXML 2.0 and 2.1 (XML interchange format) Text (ASCII mass and intensity values)