What is 3DiCSI?

3DiCSI

3DiCSI is a cool Windows app designed to help you check out and understand Chemical Shift Imaging (CSI) data. It can handle all sorts of multi-dimension data sets, whether it's 1D, 2D single/multi slice, or even 3D CSI!

Supported Image Types

This tool works with different image types like Philips (PAR/REC), GE Genesis (pre 11), GE Excite 11.0 or later (DICOM), Siemens (MAG file), Standard DICOM files, and Bruker (2dseq file). If you come across an unknown data type, don’t worry! You can manually enter the specific parameters and even add more file formats using third-party plugins.

Viewing Your Data

You can take a look at CSI data along with anatomic reference images all in one window! Plus, each voxel can be previewed in its panel, showing its spatial location in three orthogonal image windows. How neat is that?

Smart Processing Tools

3DiCSI also offers smart processing tools that let you manipulate your data set in real time. You can phase it, zero-fill it, smooth it out spatially, filter it, and correct the baseline. Some key features include constant phase correction, temporal filtering (like Lorentzian and Gaussian), spatial smoothing options like Hamming and Cosine smoothing, water suppression, PPM origin adjustments, lipid suppression, and peak alignment.

Batch Actions Made Easy

If you're working on multiple exams at once, batch actions are super handy! You can record a sequence of processing steps into macro files for future use on any CSI data set. It saves so much time!

Exporting Project Reports

You can export project reports to HTML format too. These reports include info about the image, spectra, metabolic map, and other important details. And if you want to save your project for later? No problem! Just print the data or save it directly to your computer.

Advanced Analysis Methods

3DiCSI comes loaded with analysis methods like Principal Component Analysis (PCA) to help detect sources of variation in your CSI data set. You can also use PCA-based iterative peak alignment to correct any frequency or phase variations. The Constrained Non-Negative Matrix Factorization (cNMF) method helps recover spectral patterns along with their spatial distributions.

A Comprehensive Suite of Features

In summary, 3DiCSI offers a full suite of features from visualization to spectral processing and quantification. It's perfect for professional users looking for advanced functionality.

If you're interested in trying out downloading 3DiCSI, head over to SoftPas for more details!

How Download Works

Go to the Softpas website, press the 'Downloads' button, and pick the app you want to download and install—easy and fast!